- Allan, L. L., Schlezinger, J. J., Shansab, M., & Sherr, D. H. (2006). CYP1A1 in polycyclic aromatic hydrocarbon-induced B lymphocyte growth suppression. Biochemical and Biophysical Research Communications, 342(1), 227-235
Bradbury, B. D., Wilk, J. B., Aschengrau, A., & Lash, T. L. (2006). Departure from multiplicative interaction for catechol-O-methyltransferase genotype and active/passive exposure to tobacco smoke among women with breast cancer. Journal of Carcinogenesis, 5:3. PMCID: PMC1373621.
Brody, J. G., Aschengrau, A., McKelvey, W., Swartz, C. H., Kennedy, T., & Rudel, R. A. (2006). Breast cancer risk and drinking water contaminated by wastewater: a case-control study. Environmental Health, 5:28. PMCID: PMC1622744.
- Chang, T. K. H., Crespi, C. L., & Waxman, D. J. (2006). Spectrophotometric analysis of human CYP2E1-catalyzed p-nitrophenol hydroxylation. In I. R. Phillips & E. A. Shephard (Eds.), Methods in molecular biology: Cytochrome P450 protocols (2nd ed.) (vol. 320) (pp. 127-131).
- Chang, T. K. H., & Waxman, D. J. (2006). Catalytic assays for human cytochrome P450. In I. R. Phillips & E. A. Shephard (Eds.), Methods in molecular biology: Cytochrome P450 protocols (2nd ed.) (vol. 320) (pp. 78-83).
- Chang, T. K. H., & Waxman, D. J. (2006). Enzymatic analysis of cDNA-expressed human CYP1A1, CYP1A2 and CYP1B1 with 7-ethoxyresorufin as substrate. In I. R. Phillips & E. A. Shephard (Eds.), Methods in molecular biology: Cytochrome P450 protocols (2nd ed.) (vol. 320) (pp. 85-90).
- Chang, T. K. H., & Waxman. D. J. (2006). Synthetic drugs and natural products as modulators of constitutive androstane receptor (CAR) and pregnane X receptor (PXR). Drug Metabolism Reviews 38(1&2), 51-73.
- Clodfelter, K.,H., Minita G. H., Hodor, P., Park, S.-H., Ray, W. J., & Waxman, D. J. (2006). Sex-dependent liver gene expression is extensive and largely dependent upon STAT5b: STAT5b-dependent activation of male genes and repression of female genes revealed by microarray analysis. Molecular Endocrinology, 20, 1333-1351.
- Clodfelter, K. H., Waxman, D. J., & Vajda, S. Computational solvent mapping reveals the importance of local conformational changes for broad substrate specificity in mammalian cytochromes P450. Biochemistry, 45(31), 9393-9407
- Crespi, C. L., Chang, T. K. H., & Waxman, D. J. (2006). CYP2D6-dependent bufuralol 1'-hydroxylation assayed by reversed-phase ion-pair high performance liquid chromatography with fluorescence detection. In I. R. Phillips & E. A. Shephard (Eds.), Methods in molecular biology: Cytochrome P450 protocols (2nd ed.) (vol. 320) (pp. 121-125).
- Dong, W., Muramoto, W., Takehana, K., Stegeman, J. J., Teraoka, H., & Hiraga, T. (2006). Oxidative stress and apoptosis induced by tributyltin in retinal neuronal cells of developing zebrafish. Japanese Journal of Veterinary Science.
- Garrick, R. A., Woodin, B. R., Wilson, J. Y., Middlebrooks, B. L., & Stegeman, J. J. (2006). Cytochrome P4501A is induced in endothelial cell lines from the kidney and lung of the bottlenose dolphin, Tursiops truncatus. Aquatic Toxicology, 76(3-4), 295-305.
- Goldstone, J. V., Hamdoun, A., Cole, B. J., Howard-Ashby, M., Nebert, D. W., Scally, M., Dean, M., Epel, D., Hahn, M. E., & Stegeman, J. J. (2006). The chemical defensome: Environmental sensing and response genes in the Strongylocentrotus purpuratus genome. Developmental Biology, 300, 366-384.
- Goldstone, H. M. H., Stegeman, J. J. (2006). A revised evolutionary history of the CYP1A subfamily: Gene duplication, gene conversion, and positive selection. Journal of Molecular Evolution, 62, 708-717.
- Goldstone, H. M. H., & Stegeman, J. J. (2006). Molecular mechanisms of 2,3,7,8-tetrachlorodibenzo-p-dioxin cardiovascular embryotoxicity. Drug Metabolism Reviews, 38(1-2), 261-289.
- Hahn, M. E., & Hestermann, E. V. (2006). Receptor-mediated mechanisms of toxicity. In R. T. Di Giulio & D. E. Hinton (Eds.), The Toxicology of Fishes. London: Taylor & Francis.
- Hahn, M. E., Karchner, S. I., Evans, B. R., Franks, D. G., Merson, R. R., & Lapseritis, J. M. (2006). Unexpected diversity of aryl hydrocarbon receptors in non-mammalian vertebrates: Insights from comparative genomics. Journal of Experimental Zoology, 305(9), 693-706.
- Kaya, T., Mohr, S. C., Waxman, D. J., & Vajda, S. (2006). Computational screening of Phthalate Monoesters for binding to PPARγ.Chemical Research in Toxicology, 19(8), 999-1009.
- Kitana, N., Khonsue, W., Won, S. J., Lance, V. A., & Callard, I. P. (2006). Gonadotropin and estrogen responses in the freshwater turtle, (Chrysemys picta) from Cape Cod, Massachusetts. General and Comparative Endocrinology, 149(1), 49-57.
- Kubota, A., Iwata, H., Goldstone, H. M. H., Kim, E.-Y., Stegeman, J. J., & Tanabe, S. (2006). Cytochrome P450 1A4 and 1A5 in Common Cormorant (Phalacrocorax carbo): Evolutionary relationships and functional implications associated with dioxin and related compounds. Toxicological Sciences, 92(2), 394-408.
- Landon, M. R., Lancia, D. R., Jr., Clodfelter, K. H., & Vajda, S. (2006). Clustering of domains of functionally related enzymes in the interaction database PRECISE by the generation of primary sequence patterns. Journal of Molecular Graphics and Modelling, 24(6), 426-433.
- Lutton, B., & Callard, I. (2006). Evolution of reproductive-immune interactions. Integrative and Comparative Biology, 46 (6), 1060-1071
- Lutton, B. V., St. George, J. P., Murrin, C. R., Fileti, L. A., & Callard. I. P. (2005). The elasmobranch ovary. In W. C. Hamlett (Ed.), Reproductive biology and phylogeny of chondrichthyes: sharks, catoids, and chimaeras (pp. 237-282). Enfield, NH: Science Publishers.
Malins, D. C., Anderson, K. M., Stegeman, J. J., Jaruga, P., Green, V. M., Gilman, N. K., & Dizdaroglu, M. (2006). Biomarkers signal contaminant effects on the organs of English sole (Parophrys vetulus) from Puget Sound. Environmental Health Perspectives, 114(6), 823-829. PMCID: PMC1480518.
- Matsuo, A. Y., Woodin, B. R., Reddy, C. M., Val, A. L., & Stegeman, J. J. (2006). Humic substances and crude oil induce cytochrome P450 1A expression in the Amazonian fish species Colossoma macropomum (Tambaqui). Environmental Science and Technology, 40(8), 2851-2858.
- McClusky, L. M. (2006). Stage-dependency of apoptosis and the blood-testis barrier in the dogfish shark (Squalus acanthias): Cadmium-induced changes as assessed by vital fluorescence techniques . Cell and Tissue Research, 325(3), 541-553.
- Merson, R. R., Franks, D. G., Karchner, S. I., & Hahn, M. E. (2006). Development and characterization of polyclonal antibodies against the aryl hydrocarbon receptor protein family (AHR1, AHR2, and AHR repressor) of Atlantic killifish Fundulus heteroclitus. Comparative Biochemistry and Physiology Part C: Pharmacology, Toxicology and Endocrinology 142, (1-2), 85-94.
- Novillo, A., Kitana, N., Won, S.-J., & Callard, I. P. (2006). Comparative environmental endocrinology, genomics and endocrine disruption. Proc. 5th Intercongress Symposium of the Asia and Oceania Society for Comparative Endocrinology (pp. 77-82).
-
Ozonoff, D., Pogel, A., Hannan, T. (2006). Generalized contingency tables and concept lattices. In J. Abello & G. Comode (Eds.), Discrete methods in epidemiology. DIMACS: Series in discrete mathematics and theoretical computer science (vol. 70) (pp. 93-114). Providence: American Mathematical Society.
- Puinean, A. M., Labadie, P., Hill, E. M., Osada, M., Kishida, M., Nakao, R., Novillo, A., Callard, I. P., et al. (2006). Laboratory exposure to 17β- estradiol fails to induce vitellogenin and estrogen receptor gene expression in the marine invertebrate Mytilus edulis. Aquatic Toxicology, 79(4), 376-383.
- Sawyer, S. J., Gerstner, K. A., & Callard, G. V. (2006). Real-time PCR analysis of cytochrome aromatase expression in zebrafish: Gene specific tissue distribution, sex differences, developmental programming and estrogen regulation. General and Comparative Endocrinology, 147(2), 108-117.
- Schlezinger, J. J., Emberley, J. K., & Sherr, D. H. (2006). Activation of multiple mitogen-activated protein kinases in pro/pre-B cells by GW7845, a peroxisome proliferator-activated receptor γ agonist, and their contribution to GW7845-induced apoptosis. Toxicological Sciences, 92(2), 433-444.
- Schlezinger, J. J., Struntz, W. D. J., Goldstone, J. V., & Stegeman, J. J. (2006). Uncoupling of cytochrome P450 1A and stimulation of reactive oxygen species production by co-planar polychlorinated biphenyl congeners. Aquatic Toxicology, 77(4), 422-432.
- Sea Urchin Genome Sequencing Consortium. (2006). The genome of the sea urchin Strongylocentrotus purpuratus. Science, 314, 941-952.
- Shipley, J. M. & Waxman, D. J. (2006). Aryl hydrocarbon receptor-independent activation of estrogen receptor-dependent transcription by 3-methycholanthrene. Toxicology and Applied Pharmacology, 213(2), 87-97.
-
Stavropoulos, P., Celenligil-Cetin, R., Kiani, S., Tapper, A. E., Pinnapareddy, D., & Paraskevopoulou, P. (2006). lron,bis(pyridine)bis(2-pyridinecarboxylato-N1,O2. In Encyclopedia of Reagents for Organic Synthesis (pp. 414-415). Hoboken, N. J.: John Wiley & Sons, Inc.
- Stuchal, L., Kleinow, K. M., Stegeman, J. J., & James, M. O. (2006). Demethylation of the pro-estrogenic pesticide methoxychlor in liver and intestine from untreated, methoxychlor-treated and 3-MC-treated catfish (Ictalurus punctatus): Evidence for roles of CYP1 and 3A family isozymes. Drug Metabolism and Disposition, 34(6), 932-938
- Tarrant, A. M., Greytak, S. R., Callard, G. V., & Hahn, M. E. (2006). Estrogen receptor-related receptors in the killifish Fundulus heteroclitus: Diversity, expression, and estrogen responsiveness. Journal of Molecular Endocrinology, 37(1), 105-120.
- Teraoka, H., Urakawa, S., Nanba, S., Nagai, Y., Dong, W., Imagawa, T., Tanguay, R. L., Svoboda, K., Goldstone, H. M. H., Stegeman, J. J., et al. (2006). Muscular contractions in the zebrafish embryo are necessary to reveal thiuram-induced notochord distortions. Toxicology and Applied Pharmacology, 212, 24-34.
- Verslycke, T., Goldstone, J. V., & Stegeman, J. J. (2006). Isolation and phylogeny of novel cytochrome P450 genes from tunicates (Ciona spp.): a CYP3 line in early deuterostomes? Molecular Phylogenetic Evolution, 40, 760-771.
- Vieira, V., Webster, T., Weinberg, J., & Aschengrau, A. (2006). Temporal-spatial analysis of breast cancer on Upper Cape Cod, Massachusetts. Proceedings of Spatial Epidemiology Conference, London 2006. Small Area Health Statistics Unit, Imperial College, London. 111-119.
- Waxman, D. J., & Chang, T. K. H. (2006). Use of 7-ethoxycoumarin to monitor multiple enzymes in the human CYP1, CYP2 and CYP3 families. In I. R. Phillips & E. A. Shephard (Eds.), Methods in molecular biology: Cytochrome P450 protocols (2nd ed.) (vol. 320) (pp. 153-156).
- Webster, T. (2006). Cross-level bias in partially ecologic studies.Proceedings of Spatial Epidemiology Conference, London 2006. Small Area Health Statistics Unit, Imperial College, London. 127-132.
Webster, T., Vieira, V., Weinberg, J., & Aschengrau, A. (2006). Method for mapping population-based case-control studies using generalized additive models. International Journal of Health Geographics, 5:26. PMCID: PMC1526437.



